[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 135 items for (author: huang & sj)

EMDB-17360:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric state produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17361:
Cryo-EM structure of the dimeric form of the anaerobic ribonucleotide reductase from Prevotella copri produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17373:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/dTTP/GTP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

EMDB-17385:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dGTP/ATP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

EMDB-17357:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/CTP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17358:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17359:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-35767:
Structure of the Mex67-Mtr2-3 heterodimer
Method: single particle / : Li ZQ, Chen SJ, Sui SF

EMDB-34638:
Structure of the Mex67-Mtr2-1 heterodimer
Method: single particle / : Li ZQ, Chen SJ, Sui SF

EMDB-34640:
Structure of Mex67-Mtr2-2 heterodimer
Method: single particle / : Li ZQ, Chen SJ, Sui SF

EMDB-34641:
Structure of Crm1-RanGTP complex
Method: single particle / : Li ZQ, Chen SJ, Sui SF

EMDB-34725:
NPC-trapped pre-60S particle
Method: single particle / : Li ZQ, Chen SJ, Sui SF

EMDB-35812:
Bud20 interacts with CFNC
Method: single particle / : Li ZQ, Chen SJ

EMDB-28092:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-093
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28090:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-040
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28091:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-045
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28093:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-156
Method: single particle / : Shek J, Callaway H, Li H, Yu X, Saphire EO

EMDB-28094:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-234
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28095:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-260
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28096:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-279
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28097:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-290
Method: single particle / : Yu X, Callaway H, Li H, Shek J, Saphire EO

EMDB-28098:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-294
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28099:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-295
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28100:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-299
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28102:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-334
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28103:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-360
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28104:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-361
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28105:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-362
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28106:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-368
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28168:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-292
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28169:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-333
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28170:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-355
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28171:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-371
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-16022:
Amyloid-beta 42 filaments extracted from the human brain with Arctic mutation (E22G) of Alzheimer's disease | ABeta42
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordberg A, Goedert M, Scheres SHW

EMDB-16023:
Amyloid-beta tetrameric filaments with the Arctic mutation (E22G) from Alzheimer's disease brains | ABeta40
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordber A, Goedert M, Scheres SHW

EMDB-16027:
Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordber A, Goedert M, Scheres SHW

PDB-8bfz:
Amyloid-beta 42 filaments extracted from the human brain with Arctic mutation (E22G) of Alzheimer's disease | ABeta42
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordberg A, Goedert M, Scheres SHW

PDB-8bg0:
Amyloid-beta tetrameric filaments with the Arctic mutation (E22G) from Alzheimer's disease brains | ABeta40
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordber A, Goedert M, Scheres SHW

PDB-8bg9:
Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta
Method: helical / : Yang Y, Zhang WJ, Murzin AG, Schweighauser M, Huang M, Lovestam SKA, Peak-Chew SY, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordber A, Goedert M, Scheres SHW

EMDB-16434:
Type Ib beta-amyloid 42 Filaments from Human Brain
Method: helical / : Yang Y, Arseni D, Zhang W, Huang M, Lovestam SKA, Schweighauser M, Kotecha A, Murzin AG, Peak-Chew SY, Macdonald J, Lavenir I, Garringer HJ, Gelpi E, Newell KL, Kovacs GG, Vidal R, Ghetti B, Falcon B, Scheres HW, Goedert M

EMDB-33233:
Cryo-EM structure of EDS1 and SAG101 with ATP-APDR
Method: single particle / : Huang SJ, Jia AL, Han ZF, Chai JJ

EMDB-33144:
Cryo-EM structure of EDS1 and PAD4
Method: single particle / : Huang SJ, Jia AL, Sun Y, Han ZF, Chai JJ

EMDB-32653:
Cryo-EM structure of the inner ring protomer of the Saccharomyces cerevisiae nuclear pore complex
Method: single particle / : Li ZQ, Chen SJB, Zhao L, Sui SF

EMDB-32658:
Cryo-EM structure of the inner ring monomer of the Saccharomyces cerevisiae nuclear pore complex
Method: single particle / : Li ZQ, Chen SJB, Zhao L, Sui SF

EMDB-32662:
Cryo-EM map of the inner ring dimer of the Saccharomyces cerevisiae nuclear pore complex
Method: single particle / : Li ZQ, Chen SJB, Zhao L, Sui SF

EMDB-32663:
Cryo-EM map of the intact inner ring of the Saccharomyces cerevisiae nuclear pore complex
Method: single particle / : Li ZQ, Chen SJB, Zhao L, Sui SF

EMDB-32664:
Cryo-EM map of the whole Saccharomyces cerevisiae nuclear pore complex
Method: single particle / : Li ZQ, Chen SJB, Zhao L, Sui SF

EMDB-32684:
SARS-CoV-2 Omicron Variant S Trimer complexed with two JMB2002 Fab
Method: single particle / : Yin W, Xu Y, Xu P, Cao X, Wu C, Gu C, He X, Wang X, Huang S, Yuan Q, Wu K, Hu W, Huang Z, Liu J, Wang Z, Jia F, Xia K, Liu P, Song B, Zheng J, Jiang H, Cheng X, Jiang Y, Deng SJ, Xu HE

EMDB-32736:
The interface of JMB2002 Fab binds to SARS-CoV-2 Omicron Variant S
Method: single particle / : Yin W, Xu Y, Xu P, Cao X, Wu C, Gu C, He X, Wang X, Huang S, Yuan Q, Wu K, Hu W, Huang Z, Liu J, Wang Z, Jia F, Xia K, Liu P, Song B, Zheng J, Jiang H, Cheng X, Jiang Y, Deng SJ, Xu HE

EMDB-32683:
SARS-CoV-2 Omicron Variant S Trimer complexed with one JMB2002 Fab
Method: single particle / : Yin W, Xu Y, Xu P, Cao X, Wu C, Gu C, He X, Wang X, Huang S, Yuan Q, Wu K, Hu W, Huang Z, Liu J, Wang Z, Jia F, Xia K, Liu P, Song B, Zheng J, Jiang H, Cheng X, Jiang Y, Deng SJ, Xu HE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more